SNP Detail For rs3803064
1.Mapping Information
Human SNP ID rs3803064
Human chromosome chr12
Human SNP position 112735689
Pig chromosome chr14
Pig SNP position 41539981
2.Annotation Information
PubMed ID21507922
JournalClin Infect Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/21507922
StudyDuffy-null-associated low neutrophil counts influence HIV-1 susceptibility in high-risk South African black women.
Disease/TraitPlatelet count
Initial sample115 African ancestry HIV-negative individuals
Replication sampleNA
Region12q24.13
Chromosome idchr12
Chromosome position112735689
Reported geneAC007425.1
Mapped geneMIR1302-1 - RPH3A
Upstream gene id100302227
Downstream gene id22895
SNP gene ids
Upstream gene distance40513
Downstream gene distance55849
SNP risk allelers3803064-?
SNPsrs3803064
Merged0
SNP id current3803064
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [874956]
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001061