SNP Detail For rs3798696
1.Mapping Information
Human SNP ID rs3798696
Human chromosome chr6
Human SNP position 10403417
Pig chromosome chr7
Pig SNP position 7540063
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region6p24.3
Chromosome idchr6
Chromosome position10403417
Reported geneTFAP2A
Mapped geneTFAP2A
Upstream gene id
Downstream gene id
SNP gene ids7020
Upstream gene distance
Downstream gene distance
SNP risk allelers3798696-?
SNPsrs3798696
Merged0
SNP id current3798696
Contextintron_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337