SNP Detail For rs3797535
1.Mapping Information
Human SNP ID rs3797535
Human chromosome chr5
Human SNP position 79004574
Pig chromosome chr2
Pig SNP position 89540919
2.Annotation Information
PubMed ID25343990
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25343990
StudyGenome-wide association study of selenium concentrations.
Disease/TraitBlood and toenail selenium levels
Initial sample9,639 European ancestry individuals
Replication sampleNA
Region5q14.1
Chromosome idchr5
Chromosome position79004574
Reported geneDMGDH, ARSB, BHMT2
Mapped geneDMGDH
Upstream gene id
Downstream gene id
SNP gene ids29958
Upstream gene distance
Downstream gene distance
SNP risk allelers3797535-T
SNPsrs3797535
Merged0
SNP id current3797535
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000000000000002
Pvalue mlog14.698970004336
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2379663] (imputed)
CNVN
Mapped traitselenium measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006331
Study accessionGCST002670