SNP Detail For rs3796392
1.Mapping Information
Human SNP ID rs3796392
Human chromosome chr3
Human SNP position 129418284
Pig chromosome JH118914-1
Pig SNP position 10219
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region3q21.3
Chromosome idchr3
Chromosome position129418284
Reported geneC3orf25, RPL32P3, MBD4
Mapped geneEFCAB12
Upstream gene id
Downstream gene id
SNP gene ids90288
Upstream gene distance
Downstream gene distance
SNP risk allelers3796392-A
SNPsrs3796392
Merged0
SNP id current3796392
Contextsynonymous_variant
Intergenic0
Allele frequency0.002
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta15.21
%95 Ci[3.37-68.63]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875