SNP Detail For rs3795578
1.Mapping Information
Human SNP ID rs3795578
Human chromosome chr1
Human SNP position 204143856
Pig chromosome chr9
Pig SNP position 71067189
2.Annotation Information
PubMed ID21177773
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/21177773
StudyAcetaminophen-NAPQI hepatotoxicity: a cell line model system genome-wide association study.
Disease/TraitResponse to acetaminophen (hepatotoxicity)
Initial sample60 European ancestry lymphoblastoid cell lines, 56 African American lymphoblastoid cell lines, 60 Han Chinese American lymphoblastoid cell lines
Replication sampleNA
Region1q32.1
Chromosome idchr1
Chromosome position204143856
Reported geneETNK2
Mapped geneETNK2
Upstream gene id
Downstream gene id
SNP gene ids55224
Upstream gene distance
Downstream gene distance
SNP risk allelers3795578-?
SNPsrs3795578
Merged0
SNP id current3795578
Contextintron_variant
Intergenic0
Allele frequency0.4
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [1348864]
CNVN
Mapped traitresponse to acetaminophen
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_1901554
Study accessionGCST000924