Human SNP ID | rs3795578 |
---|---|
Human chromosome | chr1 |
Human SNP position | 204143856 |
Pig chromosome | chr9 |
Pig SNP position | 71067189 |
PubMed ID | 21177773 |
---|---|
Journal | Toxicol Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/21177773 |
Study | Acetaminophen-NAPQI hepatotoxicity: a cell line model system genome-wide association study. |
Disease/Trait | Response to acetaminophen (hepatotoxicity) |
Initial sample | 60 European ancestry lymphoblastoid cell lines, 56 African American lymphoblastoid cell lines, 60 Han Chinese American lymphoblastoid cell lines |
Replication sample | NA |
Region | 1q32.1 |
Chromosome id | chr1 |
Chromosome position | 204143856 |
Reported gene | ETNK2 |
Mapped gene | ETNK2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55224 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3795578-? |
SNPs | rs3795578 |
Merged | 0 |
SNP id current | 3795578 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.4 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [1348864] |
CNV | N |
Mapped trait | response to acetaminophen |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_1901554 |
Study accession | GCST000924 |