SNP Detail For rs3792366
1.Mapping Information
Human SNP ID rs3792366
Human chromosome chr3
Human SNP position 123121029
Pig chromosome chr13
Pig SNP position 146889332
2.Annotation Information
PubMed ID22139419
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/22139419
StudyNew gene functions in megakaryopoiesis and platelet formation.
Disease/TraitPlatelet count
Initial sample47,005 European ancestry individuals, 1,661 Val Borbera individuals
Replication sampleUp to 18,838 European ancestry individuals
Region3q21.1
Chromosome idchr3
Chromosome position123121029
Reported genePDIA5
Mapped genePDIA5
Upstream gene id
Downstream gene id
SNP gene ids10954
Upstream gene distance
Downstream gene distance
SNP risk allelers3792366-G
SNPsrs3792366
Merged0
SNP id current3792366
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta2.153
%95 Ci[1.44-2.87] 10^9/l increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001337