SNP Detail For rs3791950
1.Mapping Information
Human SNP ID rs3791950
Human chromosome chr2
Human SNP position 217865142
Pig chromosome chr15
Pig SNP position 133090376
2.Annotation Information
PubMed ID21998595
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21998595
StudyIdentification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry.
Disease/TraitHeight
Initial sample20,427 African ancestry individuals
Replication sampleUp to 16,436 African American individuals
Region2q35
Chromosome idchr2
Chromosome position217865142
Reported geneTNS1
Mapped geneTNS1
Upstream gene id
Downstream gene id
SNP gene ids7145
Upstream gene distance
Downstream gene distance
SNP risk allelers3791950-A
SNPsrs3791950
Merged0
SNP id current3791950
Contextintron_variant
Intergenic0
Allele frequency0.89
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.061
%95 Ci[0.036-0.086] unit decrease
PlatformAffymetrix, Illumina [3310998] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001263