Human SNP ID | rs3785856 |
---|---|
Human chromosome | chr17 |
Human SNP position | 61314018 |
Pig chromosome | chr12 |
Pig SNP position | 38423694 |
PubMed ID | 23468962 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23468962 |
Study | A genome-wide scan for breast cancer risk haplotypes among African American women. |
Disease/Trait | Breast cancer |
Initial sample | 3,016 African American cases, 2,745 African American controls |
Replication sample | NA |
Region | 17q23.2 |
Chromosome id | chr17;17 |
Chromosome position | 61319088;61314018 |
Reported gene | |
Mapped gene | BCAS3; BCAS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10853029-?; rs3785856-? |
SNPs | rs10853029; rs3785856 |
Merged | 0 |
SNP id current | |
Context | intron_variant; intron_variant |
Intergenic | |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Haplotype-?????) |
Or beta | |
%95 Ci | |
Platform | Illumina [1006480] |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001879 |