SNP Detail For rs378363
1.Mapping Information
Human SNP ID rs378363
Human chromosome chr9
Human SNP position 9020223
Pig chromosome chr1
Pig SNP position 238241439
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine - clinic-based
Initial sample5,175 European ancestry clinic-based cases, 13,972 European ancestry clinic-based controls
Replication sampleNA
Region9p23
Chromosome idchr9
Chromosome position9020223
Reported geneintergenic
Mapped genePTPRD
Upstream gene id
Downstream gene id
SNP gene ids5789
Upstream gene distance
Downstream gene distance
SNP risk allelers378363-?
SNPsrs378363
Merged0
SNP id current378363
Contextintron_variant
Intergenic0
Allele frequency0.77
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.14
%95 Ci[1.08-1.2]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002079