SNP Detail For rs378352
1.Mapping Information
Human SNP ID rs378352
Human chromosome chr6
Human SNP position 33007157
Pig chromosome chr7
Pig SNP position 29546926
2.Annotation Information
PubMed ID25802187
JournalHepatology
Linkwww.ncbi.nlm.nih.gov/pubmed/25802187
StudyGenetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis B.
Disease/TraitChronic hepatitis B infection
Initial sample2,514 Chinese ancestry cases, 1,130 Chinese ancestry controls
Replication sample6,600 Chinese ancestry cases, 8,127 Chinese ancestry controls
Region6p21.32
Chromosome idchr6
Chromosome position33007157
Reported geneHLA-DOA
Mapped geneHLA-DOA
Upstream gene id
Downstream gene id
SNP gene ids3111
Upstream gene distance
Downstream gene distance
SNP risk allelers378352-T
SNPsrs378352
Merged0
SNP id current378352
Contextsynonymous_variant
Intergenic0
Allele frequency0.39
P value1E-23
Pvalue mlog23
P value text
Or beta1.26
%95 Ci[1.20-1.31]
PlatformIllumina [3680900] (imputed)
CNVN
Mapped traitchronic hepatitis B infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004239
Study accessionGCST002879