Human SNP ID | rs378352 |
---|---|
Human chromosome | chr6 |
Human SNP position | 33007157 |
Pig chromosome | chr7 |
Pig SNP position | 29546926 |
PubMed ID | 25802187 |
---|---|
Journal | Hepatology |
Link | www.ncbi.nlm.nih.gov/pubmed/25802187 |
Study | Genetic variants in five novel loci including CFB and CD40 predispose to chronic hepatitis B. |
Disease/Trait | Chronic hepatitis B infection |
Initial sample | 2,514 Chinese ancestry cases, 1,130 Chinese ancestry controls |
Replication sample | 6,600 Chinese ancestry cases, 8,127 Chinese ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 33007157 |
Reported gene | HLA-DOA |
Mapped gene | HLA-DOA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3111 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs378352-T |
SNPs | rs378352 |
Merged | 0 |
SNP id current | 378352 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.39 |
P value | 1E-23 |
Pvalue mlog | 23 |
P value text | |
Or beta | 1.26 |
%95 Ci | [1.20-1.31] |
Platform | Illumina [3680900] (imputed) |
CNV | N |
Mapped trait | chronic hepatitis B infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004239 |
Study accession | GCST002879 |