SNP Detail For rs3782889
1.Mapping Information
Human SNP ID rs3782889
Human chromosome chr12
Human SNP position 110912851
Pig chromosome chr14
Pig SNP position 34178875
2.Annotation Information
PubMed ID23364394
JournalJ Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23364394
StudyA genome-wide association study of a coronary artery disease risk variant.
Disease/TraitCoronary heart disease
Initial sample2,123 Korean ancestry cases, 3,591 Korean ancestry controls
Replication sample3,052 Japanese ancestry cases, 4,976 Japanese ancestry controls
Region12q24.11
Chromosome idchr12
Chromosome position110912851
Reported geneMYL2
Mapped geneMYL2
Upstream gene id
Downstream gene id
SNP gene ids4633
Upstream gene distance
Downstream gene distance
SNP risk allelers3782889-C
SNPsrs3782889
Merged0
SNP id current3782889
Contextintron_variant
Intergenic0
Allele frequency0.21
P value0.00000000000004
Pvalue mlog13.397940008672
P value text
Or beta1.26
%95 Ci[1.19-1.34]
PlatformAffymetrix [521786]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST001845