SNP Detail For rs3781684
1.Mapping Information
Human SNP ID rs3781684
Human chromosome chr11
Human SNP position 77112438
Pig chromosome chr9
Pig SNP position 12325356
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region11q13.5
Chromosome idchr11
Chromosome position77112438
Reported geneCAPN5
Mapped geneCAPN5
Upstream gene id
Downstream gene id
SNP gene ids726
Upstream gene distance
Downstream gene distance
SNP risk allelers3781684-?
SNPsrs3781684
Merged0
SNP id current3781684
Contextintron_variant
Intergenic0
Allele frequency0.1135
P value0.000007
Pvalue mlog5.15490195998574
P value text(VRM)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477