Human SNP ID | rs3779483 |
---|---|
Human chromosome | chr7 |
Human SNP position | 95826533 |
Pig chromosome | chr9 |
Pig SNP position | 82867951 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Dementia and core Alzheimer__s disease neuropathologic changes |
Initial sample | up to 3,887 cases, up to 1,027 controls |
Replication sample | NA |
Region | 7q21.3 |
Chromosome id | chr7 |
Chromosome position | 95826533 |
Reported gene | DYNC1I1 |
Mapped gene | DYNC1I1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1780 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3779483-T |
SNPs | rs3779483 |
Merged | 0 |
SNP id current | 3779483 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0553 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Primary) |
Or beta | 1.2925 |
%95 Ci | [0.76-1.82] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | dementia, Alzheimer__s disease neuropathologic change |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003862, http://www.ebi.ac.uk/efo/EFO_0006801 |
Study accession | GCST002593 |
PubMed ID | 25188341 |
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Dementia and core Alzheimer__s disease neuropathologic changes |
Initial sample | up to 3,887 cases, up to 1,027 controls |
Replication sample | NA |
Region | 7q21.3 |
Chromosome id | chr7 |
Chromosome position | 95826533 |
Reported gene | DYNC1I1 |
Mapped gene | DYNC1I1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1780 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3779483-T |
SNPs | rs3779483 |
Merged | 0 |
SNP id current | 3779483 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0554 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Complete) |
Or beta | 1.2911 |
%95 Ci | [0.76-1.82] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | dementia, Alzheimer__s disease neuropathologic change |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003862, http://www.ebi.ac.uk/efo/EFO_0006801 |
Study accession | GCST002593 |