SNP Detail For rs3777200
1.Mapping Information
Human SNP ID rs3777200
Human chromosome chr5
Human SNP position 95899087
Pig chromosome chr2
Pig SNP position 106417036
2.Annotation Information
PubMed ID23022100
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23022100
StudyDiscovery and fine mapping of serum protein loci through transethnic meta-analysis.
Disease/TraitSerum total protein level
Initial sampleUp to 25,539 European ancestry individuals, 10,168 Japanese ancestry individuals
Replication sampleNA
Region5q15
Chromosome idchr5
Chromosome position95899087
Reported geneELL2
Mapped geneELL2
Upstream gene id
Downstream gene id
SNP gene ids22936
Upstream gene distance
Downstream gene distance
SNP risk allelers3777200-T
SNPsrs3777200
Merged0
SNP id current3777200
Contextintron_variant
Intergenic0
Allele frequency0.27
P value0.00000001
Pvalue mlog8
P value text
Or beta0.0204
%95 Ci[0.013-0.027] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traittotal blood protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004536
Study accessionGCST001698