SNP Detail For rs3775182
1.Mapping Information
Human SNP ID rs3775182
Human chromosome chr4
Human SNP position 86058430
Pig chromosome chr8
Pig SNP position 142101903
2.Annotation Information
PubMed ID24483146
JournalBMC Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/24483146
StudyDiscovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines.
Disease/TraitResponse to cytidine analogues (gemcitabine)
Initial sample60 European ancestry lymphoblastoid cell lines, 54 African American lymphoblastoid cell lines, 60 Han Chinese ancestry lymphoblastoid cell lines
Replication sampleNA
Region4q21.3
Chromosome idchr4
Chromosome position86058430
Reported geneMAPK10
Mapped geneMAPK10
Upstream gene id
Downstream gene id
SNP gene ids5602
Upstream gene distance
Downstream gene distance
SNP risk allelers3775182-?
SNPsrs3775182
Merged0
SNP id current3775182
Contextintron_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [1348798]
CNVN
Mapped traitresponse to gemcitabine
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036272
Study accessionGCST002343