SNP Detail For rs3773582
1.Mapping Information
Human SNP ID rs3773582
Human chromosome chr3
Human SNP position 54983722
Pig chromosome chr13
Pig SNP position 40293882
2.Annotation Information
PubMed ID24096698
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24096698
StudyGenome-wide association study of endometrial cancer in E2C2.
Disease/TraitEndometrial cancer
Initial sampleup to 2,695 European ancestry cases, up to 2,777 European ancestry controls
Replication sampleup to 3,235 cases, up to 12,059 controls
Region3p14.3
Chromosome idchr3
Chromosome position54983722
Reported geneCACNA2D3
Mapped geneCACNA2D3
Upstream gene id
Downstream gene id
SNP gene ids55799
Upstream gene distance
Downstream gene distance
SNP risk allelers3773582-?
SNPsrs3773582
Merged0
SNP id current3773582
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(European, Endometroid subtype)
Or beta
%95 Ci
PlatformIllumina [873935]
CNVN
Mapped traitendometrial neoplasm
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004230
Study accessionGCST002218