Human SNP ID | rs3773582 |
---|---|
Human chromosome | chr3 |
Human SNP position | 54983722 |
Pig chromosome | chr13 |
Pig SNP position | 40293882 |
PubMed ID | 24096698 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24096698 |
Study | Genome-wide association study of endometrial cancer in E2C2. |
Disease/Trait | Endometrial cancer |
Initial sample | up to 2,695 European ancestry cases, up to 2,777 European ancestry controls |
Replication sample | up to 3,235 cases, up to 12,059 controls |
Region | 3p14.3 |
Chromosome id | chr3 |
Chromosome position | 54983722 |
Reported gene | CACNA2D3 |
Mapped gene | CACNA2D3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55799 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3773582-? |
SNPs | rs3773582 |
Merged | 0 |
SNP id current | 3773582 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (European, Endometroid subtype) |
Or beta | |
%95 Ci | |
Platform | Illumina [873935] |
CNV | N |
Mapped trait | endometrial neoplasm |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004230 |
Study accession | GCST002218 |