Human SNP ID | rs3764650 |
---|---|
Human chromosome | chr19 |
Human SNP position | 1046521 |
Pig chromosome | chr2 |
Pig SNP position | 77627421 |
PubMed ID | 21460840 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21460840 |
Study | Common variants at ABCA7, MS4A6A/MS4A4E, EPHA1, CD33 and CD2AP are associated with Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease |
Initial sample | 6,688 European ancestry cases, 13,685 European ancestry controls |
Replication sample | 13,182 European ancestry cases, 26,161 European ancestry controls |
Region | 19p13.3 |
Chromosome id | chr19 |
Chromosome position | 1046521 |
Reported gene | ABCA7 |
Mapped gene | ABCA7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10347 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3764650-? |
SNPs | rs3764650 |
Merged | 0 |
SNP id current | 3764650 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1 |
P value | 0.00000000000000005 |
Pvalue mlog | 16.3010299956639 |
P value text | |
Or beta | 1.23 |
%95 Ci | [1.18-1.30] |
Platform | Affymetrix, Illumina [496763] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST001025 |