SNP Detail For rs3758171
1.Mapping Information
Human SNP ID rs3758171
Human chromosome chr9
Human SNP position 36997420
Pig chromosome chr1
Pig SNP position 265599764
2.Annotation Information
PubMed ID22449649
JournalJ Am Acad Child Adolesc Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22449649
StudyGenome-wide association study of intelligence: additive effects of novel brain expressed genes.
Disease/TraitIntelligence
Initial sample656 European ancestry individuals from ADHD families
Replication sampleNA
Region9p13.2
Chromosome idchr9;9;9;9
Chromosome position36998996;37002118;37000690;36997420
Reported genePAX5
Mapped genePAX5; PAX5; PAX5; PAX5
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers1329573-?; rs7020413-?; rs3824344-?; rs3758171-?
SNPsrs1329573; rs7020413; rs3824344; rs3758171
Merged0
SNP id current
Contextintron_variant; intron_variant; intron_variant; intron_variant
Intergenic
Allele frequencyNR
P value0.00000004
Pvalue mlog7.39794000867203
P value text(Neurodevelopment)
Or beta
%95 Ci
PlatformIllumina [795637]
CNVN
Mapped traitintelligence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004337
Study accessionGCST001428