Human SNP ID | rs3757037 |
---|---|
Human chromosome | chr6 |
Human SNP position | 161276368 |
Pig chromosome | chr1 |
Pig SNP position | 8296650 |
PubMed ID | 26377243 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26377243 |
Study | Genome- and exome-wide association study of serum lipoprotein (a) in the Jackson Heart Study. |
Disease/Trait | Lipoprotein (a) levels |
Initial sample | 2,895 African American individuals |
Replication sample | NA |
Region | 6q26 |
Chromosome id | chr6 |
Chromosome position | 161276368 |
Reported gene | AGPAT4 |
Mapped gene | AGPAT4 - LOC105378094 |
Upstream gene id | 56895 |
Downstream gene id | 105378094 |
SNP gene ids | |
Upstream gene distance | 2293 |
Downstream gene distance | 59882 |
SNP risk allele | rs3757037-G |
SNPs | rs3757037 |
Merged | |
SNP id current | 3757037 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.66 |
P value | 0.0000000000003 |
Pvalue mlog | 12.5228787452803 |
P value text | |
Or beta | 0.2 |
%95 Ci | [0.14-0.26] unit increase |
Platform | Affymetrix [up to 38000000] (imputed) |
CNV | N |
Mapped trait | lipoprotein A measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006925 |
Study accession | GCST003127 |