SNP Detail For rs3757037
1.Mapping Information
Human SNP ID rs3757037
Human chromosome chr6
Human SNP position 161276368
Pig chromosome chr1
Pig SNP position 8296650
2.Annotation Information
PubMed ID26377243
JournalJ Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26377243
StudyGenome- and exome-wide association study of serum lipoprotein (a) in the Jackson Heart Study.
Disease/TraitLipoprotein (a) levels
Initial sample2,895 African American individuals
Replication sampleNA
Region6q26
Chromosome idchr6
Chromosome position161276368
Reported geneAGPAT4
Mapped geneAGPAT4 - LOC105378094
Upstream gene id56895
Downstream gene id105378094
SNP gene ids
Upstream gene distance2293
Downstream gene distance59882
SNP risk allelers3757037-G
SNPsrs3757037
Merged
SNP id current3757037
Contextupstream_gene_variant
Intergenic1
Allele frequency0.66
P value0.0000000000003
Pvalue mlog12.5228787452803
P value text
Or beta0.2
%95 Ci[0.14-0.26] unit increase
PlatformAffymetrix [up to 38000000] (imputed)
CNVN
Mapped traitlipoprotein A measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006925
Study accessionGCST003127