Human SNP ID | rs3747113 |
---|---|
Human chromosome | chr22 |
Human SNP position | 24321550 |
Pig chromosome | chr14 |
Pig SNP position | 52826720 |
PubMed ID | 26528553 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer) |
Initial sample | 91 Hutterite individuals |
Replication sample | NA |
Region | 22q11.23 |
Chromosome id | chr22 |
Chromosome position | 24321550 |
Reported gene | NR |
Mapped gene | SPECC1L, SPECC1L-ADORA2A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23384, 101730217 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3747113-? |
SNPs | rs3747113 |
Merged | 0 |
SNP id current | 3747113 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (genus_Lactococcus) |
Or beta | 0.8011847 |
%95 Ci | [0.5-1.1] unit increase |
Platform | Affymetrix [210924] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003221 |