SNP Detail For rs3747113
1.Mapping Information
Human SNP ID rs3747113
Human chromosome chr22
Human SNP position 24321550
Pig chromosome chr14
Pig SNP position 52826720
2.Annotation Information
PubMed ID26528553
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26528553
StudyGenome-Wide Association Studies of the Human Gut Microbiota.
Disease/TraitGut microbiome composition (summer)
Initial sample91 Hutterite individuals
Replication sampleNA
Region22q11.23
Chromosome idchr22
Chromosome position24321550
Reported geneNR
Mapped geneSPECC1L, SPECC1L-ADORA2A
Upstream gene id
Downstream gene id
SNP gene ids23384, 101730217
Upstream gene distance
Downstream gene distance
SNP risk allelers3747113-?
SNPsrs3747113
Merged0
SNP id current3747113
Contextsynonymous_variant
Intergenic0
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text(genus_Lactococcus)
Or beta0.8011847
%95 Ci[0.5-1.1] unit increase
PlatformAffymetrix [210924]
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003221