Human SNP ID | rs3744728 |
---|---|
Human chromosome | chr17 |
Human SNP position | 6190631 |
Pig chromosome | chr12 |
Pig SNP position | 53084921 |
PubMed ID | 23092984 |
---|---|
Journal | Transl Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23092984 |
Study | Genome-wide association of mood-incongruent psychotic bipolar disorder. |
Disease/Trait | Bipolar disorder with mood-incongruent psychosis |
Initial sample | 2,196 European and other ancestry cases, 8,148 European and other ancestry controls |
Replication sample | NA |
Region | 17p13.2 |
Chromosome id | chr17 |
Chromosome position | 6190631 |
Reported gene | WSC domain containing 1 |
Mapped gene | LOC105371508 - LOC105371509 |
Upstream gene id | 105371508 |
Downstream gene id | 105371509 |
SNP gene ids | |
Upstream gene distance | 84 |
Downstream gene distance | 151888 |
SNP risk allele | rs3744728-C |
SNPs | rs3744728 |
Merged | 0 |
SNP id current | 3744728 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.51 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST001715 |