SNP Detail For rs3744728
1.Mapping Information
Human SNP ID rs3744728
Human chromosome chr17
Human SNP position 6190631
Pig chromosome chr12
Pig SNP position 53084921
2.Annotation Information
PubMed ID23092984
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23092984
StudyGenome-wide association of mood-incongruent psychotic bipolar disorder.
Disease/TraitBipolar disorder with mood-incongruent psychosis
Initial sample2,196 European and other ancestry cases, 8,148 European and other ancestry controls
Replication sampleNA
Region17p13.2
Chromosome idchr17
Chromosome position6190631
Reported geneWSC domain containing 1
Mapped geneLOC105371508 - LOC105371509
Upstream gene id105371508
Downstream gene id105371509
SNP gene ids
Upstream gene distance84
Downstream gene distance151888
SNP risk allelers3744728-C
SNPsrs3744728
Merged0
SNP id current3744728
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.51
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001715