Human SNP ID | rs3743200 |
---|---|
Human chromosome | chr15 |
Human SNP position | 78981704 |
Pig chromosome | chr7 |
Pig SNP position | 53675097 |
PubMed ID | 20031603 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031603 |
Study | A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. |
Disease/Trait | RR interval (heart rate) |
Initial sample | 2,325 European ancestry individuals |
Replication sample | NA |
Region | 15q25.1 |
Chromosome id | chr15 |
Chromosome position | 78981704 |
Reported gene | RASGRF1 |
Mapped gene | RASGRF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5923 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3743200-A |
SNPs | rs3743200 |
Merged | 0 |
SNP id current | 3743200 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.27 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.16 |
%95 Ci | [0.10-0.22] unit increase |
Platform | Illumina [~ 318327] |
CNV | N |
Mapped trait | RR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004831 |
Study accession | GCST000451 |