SNP Detail For rs3743200
1.Mapping Information
Human SNP ID rs3743200
Human chromosome chr15
Human SNP position 78981704
Pig chromosome chr7
Pig SNP position 53675097
2.Annotation Information
PubMed ID20031603
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031603
StudyA genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
Disease/TraitRR interval (heart rate)
Initial sample2,325 European ancestry individuals
Replication sampleNA
Region15q25.1
Chromosome idchr15
Chromosome position78981704
Reported geneRASGRF1
Mapped geneRASGRF1
Upstream gene id
Downstream gene id
SNP gene ids5923
Upstream gene distance
Downstream gene distance
SNP risk allelers3743200-A
SNPsrs3743200
Merged0
SNP id current3743200
Contextintron_variant
Intergenic0
Allele frequency0.27
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.16
%95 Ci[0.10-0.22] unit increase
PlatformIllumina [~ 318327]
CNVN
Mapped traitRR interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004831
Study accessionGCST000451