Human SNP ID | rs3742207 |
---|---|
Human chromosome | chr13 |
Human SNP position | 110166251 |
Pig chromosome | chr11 |
Pig SNP position | 84387169 |
PubMed ID | 20031579 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031579 |
Study | COL4A1 is associated with arterial stiffness by genome-wide association scan. |
Disease/Trait | Arterial stiffness |
Initial sample | 4,221 Sardinian individuals |
Replication sample | 1,828 Sardinian individuals, 813 Old Order Amish individuals |
Region | 13q34 |
Chromosome id | chr13 |
Chromosome position | 110166251 |
Reported gene | COL4A1 |
Mapped gene | COL4A1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1282 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3742207-C |
SNPs | rs3742207 |
Merged | 0 |
SNP id current | 3742207 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.44 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | 21 |
%95 Ci | [11.79-30.21] cm/s increase |
Platform | Affymetrix [362129] (imputed) |
CNV | N |
Mapped trait | arterial stiffness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004517 |
Study accession | GCST000370 |