SNP Detail For rs3742207
1.Mapping Information
Human SNP ID rs3742207
Human chromosome chr13
Human SNP position 110166251
Pig chromosome chr11
Pig SNP position 84387169
2.Annotation Information
PubMed ID20031579
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031579
StudyCOL4A1 is associated with arterial stiffness by genome-wide association scan.
Disease/TraitArterial stiffness
Initial sample4,221 Sardinian individuals
Replication sample1,828 Sardinian individuals, 813 Old Order Amish individuals
Region13q34
Chromosome idchr13
Chromosome position110166251
Reported geneCOL4A1
Mapped geneCOL4A1
Upstream gene id
Downstream gene id
SNP gene ids1282
Upstream gene distance
Downstream gene distance
SNP risk allelers3742207-C
SNPsrs3742207
Merged0
SNP id current3742207
Contextmissense_variant
Intergenic0
Allele frequency0.44
P value0.00000005
Pvalue mlog7.30102999566398
P value text
Or beta21
%95 Ci[11.79-30.21] cm/s increase
PlatformAffymetrix [362129] (imputed)
CNVN
Mapped traitarterial stiffness measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004517
Study accessionGCST000370