Human SNP ID | rs3739998 |
---|---|
Human chromosome | chr10 |
Human SNP position | 30027143 |
Pig chromosome | chr10 |
Pig SNP position | 45421048 |
PubMed ID | 21088011 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/21088011 |
Study | Genome-wide association study identifies a new locus for coronary artery disease on chromosome 10p11.23. |
Disease/Trait | Coronary heart disease |
Initial sample | 1,157 European ancestry cases, 1,748 European ancestry controls |
Replication sample | 7,887 European ancestry cases, 8,244 European ancestry controls |
Region | 10p11.23 |
Chromosome id | chr10 |
Chromosome position | 30027143 |
Reported gene | KIAA1462 |
Mapped gene | KIAA1462 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57608 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3739998-C |
SNPs | rs3739998 |
Merged | 0 |
SNP id current | 3739998 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.44 |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.11-1.20] |
Platform | Affymetrix [254558] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000875 |