SNP Detail For rs3739998
1.Mapping Information
Human SNP ID rs3739998
Human chromosome chr10
Human SNP position 30027143
Pig chromosome chr10
Pig SNP position 45421048
2.Annotation Information
PubMed ID21088011
JournalEur Heart J
Linkwww.ncbi.nlm.nih.gov/pubmed/21088011
StudyGenome-wide association study identifies a new locus for coronary artery disease on chromosome 10p11.23.
Disease/TraitCoronary heart disease
Initial sample1,157 European ancestry cases, 1,748 European ancestry controls
Replication sample7,887 European ancestry cases, 8,244 European ancestry controls
Region10p11.23
Chromosome idchr10
Chromosome position30027143
Reported geneKIAA1462
Mapped geneKIAA1462
Upstream gene id
Downstream gene id
SNP gene ids57608
Upstream gene distance
Downstream gene distance
SNP risk allelers3739998-C
SNPsrs3739998
Merged0
SNP id current3739998
Contextmissense_variant
Intergenic0
Allele frequency0.44
P value0.00000000001
Pvalue mlog11
P value text
Or beta1.15
%95 Ci[1.11-1.20]
PlatformAffymetrix [254558]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000875