SNP Detail For rs3734398
1.Mapping Information
Human SNP ID rs3734398
Human chromosome chr6
Human SNP position 10982740
Pig chromosome chr7
Pig SNP position 7978813
2.Annotation Information
PubMed ID21829377
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21829377
StudyGenetic loci associated with plasma phospholipid n-3 fatty acids: a meta-analysis of genome-wide association studies from the CHARGE Consortium.
Disease/TraitPhospholipid levels (plasma)
Initial sample8,866 European ancestry individuals
Replication sampleNA
Region6p24.2
Chromosome idchr6
Chromosome position10982740
Reported geneELOVL2
Mapped geneELOVL2
Upstream gene id
Downstream gene id
SNP gene ids54898
Upstream gene distance
Downstream gene distance
SNP risk allelers3734398-T
SNPsrs3734398
Merged0
SNP id current3734398
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value1E-43
Pvalue mlog43
P value text(DPA)
Or beta0.04
%95 Ci[NR] % decrease
PlatformAffymetrix, Illumina [NR]
CNVN
Mapped traitphospholipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004639
Study accessionGCST001179