SNP Detail For rs3733655
1.Mapping Information
Human SNP ID rs3733655
Human chromosome chr4
Human SNP position 31144396
Pig chromosome chr8
Pig SNP position 24733032
2.Annotation Information
PubMed ID26674333
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26674333
StudyGenome-wide meta-analysis of cerebral white matter hyperintensities in patients with stroke.
Disease/TraitWhite matter hyperintensities in ischemic stroke
Initial sample3,670 European ancestry cases
Replication sampleNA
Region4p15.1
Chromosome idchr4
Chromosome position31144396
Reported genePCDH7
Mapped genePCDH7
Upstream gene id
Downstream gene id
SNP gene ids5099
Upstream gene distance
Downstream gene distance
SNP risk allelers3733655-A
SNPsrs3733655
Merged
SNP id current3733655
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.64
P value0.000001
Pvalue mlog6
P value text
Or beta1.13
%95 Ci[1.07鈥?.18]
PlatformAffymetrix, Illumina [7567914] (imputed)
CNVN
Mapped traitIschemic stroke, white matter hyperintensity measurement
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140, http://www.ebi.ac.uk/efo/EFO_0005665
Study accessionGCST003245