SNP Detail For rs372883
1.Mapping Information
Human SNP ID rs372883
Human chromosome chr21
Human SNP position 29345416
Pig chromosome chr13
Pig SNP position 203231098
2.Annotation Information
PubMed ID22158540
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22158540
StudyGenome-wide association study identifies five loci associated with susceptibility to pancreatic cancer in Chinese populations.
Disease/TraitPancreatic cancer
Initial sample981 Han Chinese ancestry cases, 1,991 Han Chinese ancestry controls
Replication sample2,603 Han Chinese ancestry cases, 2,877 Han Chinese ancestry controls
Region21q21.3
Chromosome idchr21
Chromosome position29345416
Reported geneBACH1
Mapped geneBACH1
Upstream gene id
Downstream gene id
SNP gene ids571
Upstream gene distance
Downstream gene distance
SNP risk allelers372883-T
SNPsrs372883
Merged0
SNP id current372883
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.0000000000002
Pvalue mlog12.698970004336
P value text
Or beta1.27
%95 Ci[1.19-1.33]
PlatformAffymetrix [666141]
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST001350