Human SNP ID | rs37060 |
---|---|
Human chromosome | chr16 |
Human SNP position | 58532400 |
Pig chromosome | chr6 |
Pig SNP position | 18463445 |
PubMed ID | 22726844 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22726844 |
Study | A common variant in SLC8A1 is associated with the duration of the electrocardiographic QT interval. |
Disease/Trait | QT interval |
Initial sample | 6,805 Korean ancestry individuals |
Replication sample | 7,373 East Asian ancestry individuals |
Region | 16q21 |
Chromosome id | chr16 |
Chromosome position | 58532400 |
Reported gene | NDRG4, CNOT1 |
Mapped gene | CNOT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23019 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs37060-? |
SNPs | rs37060 |
Merged | 0 |
SNP id current | 37060 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.52 |
%95 Ci | [0.957-2.084] ms increase |
Platform | Affymetrix [352228] |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001580 |