SNP Detail For rs37060
1.Mapping Information
Human SNP ID rs37060
Human chromosome chr16
Human SNP position 58532400
Pig chromosome chr6
Pig SNP position 18463445
2.Annotation Information
PubMed ID22726844
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22726844
StudyA common variant in SLC8A1 is associated with the duration of the electrocardiographic QT interval.
Disease/TraitQT interval
Initial sample6,805 Korean ancestry individuals
Replication sample7,373 East Asian ancestry individuals
Region16q21
Chromosome idchr16
Chromosome position58532400
Reported geneNDRG4, CNOT1
Mapped geneCNOT1
Upstream gene id
Downstream gene id
SNP gene ids23019
Upstream gene distance
Downstream gene distance
SNP risk allelers37060-?
SNPsrs37060
Merged0
SNP id current37060
Contextsplice_region_variant
Intergenic0
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text
Or beta1.52
%95 Ci[0.957-2.084] ms increase
PlatformAffymetrix [352228]
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST001580