Human SNP ID | rs370409 |
---|---|
Human chromosome | chr6 |
Human SNP position | 90212021 |
Pig chromosome | chr1 |
Pig SNP position | 65191015 |
PubMed ID | 21841780 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21841780 |
Study | A genome-wide association study identifies two new risk loci for Graves__ disease. |
Disease/Trait | Graves__ disease |
Initial sample | 1,468 Chinese ancestry cases, 1,490 Chinese ancestry controls |
Replication sample | 3,994 Chinese ancestry cases, 3,510 Chinese ancestry controls |
Region | 6q15 |
Chromosome id | chr6 |
Chromosome position | 90212021 |
Reported gene | MAP3K7, BACH2 |
Mapped gene | BACH2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 60468 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs370409-T |
SNPs | rs370409 |
Merged | 0 |
SNP id current | 370409 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.67 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.09-1.22] |
Platform | Illumina [486049] |
CNV | N |
Mapped trait | Graves disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004237 |
Study accession | GCST001200 |