SNP Detail For rs370409
1.Mapping Information
Human SNP ID rs370409
Human chromosome chr6
Human SNP position 90212021
Pig chromosome chr1
Pig SNP position 65191015
2.Annotation Information
PubMed ID21841780
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21841780
StudyA genome-wide association study identifies two new risk loci for Graves__ disease.
Disease/TraitGraves__ disease
Initial sample1,468 Chinese ancestry cases, 1,490 Chinese ancestry controls
Replication sample3,994 Chinese ancestry cases, 3,510 Chinese ancestry controls
Region6q15
Chromosome idchr6
Chromosome position90212021
Reported geneMAP3K7, BACH2
Mapped geneBACH2
Upstream gene id
Downstream gene id
SNP gene ids60468
Upstream gene distance
Downstream gene distance
SNP risk allelers370409-T
SNPsrs370409
Merged0
SNP id current370409
Contextintron_variant
Intergenic0
Allele frequency0.67
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.15
%95 Ci[1.09-1.22]
PlatformIllumina [486049]
CNVN
Mapped traitGraves disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004237
Study accessionGCST001200