SNP Detail For rs366676
1.Mapping Information
Human SNP ID rs366676
Human chromosome chr6
Human SNP position 88008048
Pig chromosome chr1
Pig SNP position 63082913
2.Annotation Information
PubMed ID17903301
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903301
StudyGenome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study.
Disease/TraitEchocardiographic traits
Initial sampleUp to 1,238 European ancestry individuals
Replication sampleNA
Region6q15
Chromosome idchr6
Chromosome position88008048
Reported geneSPACA1
Mapped geneLOC105377882 - SPACA1
Upstream gene id105377882
Downstream gene id81833
SNP gene ids
Upstream gene distance65537
Downstream gene distance38987
SNP risk allelers366676-?
SNPsrs366676
Merged0
SNP id current366676
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(LVFS)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitcardiovascular measurement, left ventricular function
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004298, http://www.ebi.ac.uk/efo/EFO_0004295
Study accessionGCST000110