Human SNP ID | rs365836 |
---|---|
Human chromosome | chr7 |
Human SNP position | 102166571 |
Pig chromosome | chr3 |
Pig SNP position | 9372182 |
PubMed ID | 22584459 |
---|---|
Journal | Pharmacogenomics J |
Link | www.ncbi.nlm.nih.gov/pubmed/22584459 |
Study | Possible association of CUX1 gene polymorphisms with antidepressant response in major depressive disorder. |
Disease/Trait | Response to antidepressants |
Initial sample | 92 Japanese ancestry cases |
Replication sample | 136 Japanese ancestry cases |
Region | 7q22.1 |
Chromosome id | chr7 |
Chromosome position | 102166571 |
Reported gene | CUX1 |
Mapped gene | CUX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1523 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs365836-A |
SNPs | rs365836 |
Merged | 0 |
SNP id current | 365836 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 4.79 |
%95 Ci | [2.38-9.64] |
Platform | Illumina [291512] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST001528 |