SNP Detail For rs36104021
1.Mapping Information
Human SNP ID rs36104021
Human chromosome chr12
Human SNP position 102967334
Pig chromosome JH118849-1
Pig SNP position 37774
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region12q23.2
Chromosome idchr12
Chromosome position102967334
Reported geneNR
Mapped geneASCL1 - C12orf42
Upstream gene id429
Downstream gene id374470
SNP gene ids
Upstream gene distance6818
Downstream gene distance112311
SNP risk allelers36104021-C
SNPsrs36104021
Merged
SNP id current36104021
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.08
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048