Human SNP ID | rs35964523 |
---|---|
Human chromosome | chr3 |
Human SNP position | 856978 |
Pig chromosome | chr17 |
Pig SNP position | 56135520 |
PubMed ID | 20339536 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/20339536 |
Study | Genome-wide association of lipid-lowering response to statins in combined study populations. |
Disease/Trait | Response to statin therapy |
Initial sample | 3,928 European ancestry individuals |
Replication sample | NA |
Region | 3p26.3 |
Chromosome id | chr3 |
Chromosome position | 856978 |
Reported gene | CNTN6, LOC402123, CHL1 |
Mapped gene | LINC01266 - CNTN6 |
Upstream gene id | 101927215 |
Downstream gene id | 27255 |
SNP gene ids | |
Upstream gene distance | 10963 |
Downstream gene distance | 151157 |
SNP risk allele | rs35964523-T |
SNPs | rs35964523 |
Merged | 0 |
SNP id current | 35964523 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (chol, sum) |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | response to statin |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036273 |
Study accession | GCST000635 |