SNP Detail For rs35964523
1.Mapping Information
Human SNP ID rs35964523
Human chromosome chr3
Human SNP position 856978
Pig chromosome chr17
Pig SNP position 56135520
2.Annotation Information
PubMed ID20339536
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/20339536
StudyGenome-wide association of lipid-lowering response to statins in combined study populations.
Disease/TraitResponse to statin therapy
Initial sample3,928 European ancestry individuals
Replication sampleNA
Region3p26.3
Chromosome idchr3
Chromosome position856978
Reported geneCNTN6, LOC402123, CHL1
Mapped geneLINC01266 - CNTN6
Upstream gene id101927215
Downstream gene id27255
SNP gene ids
Upstream gene distance10963
Downstream gene distance151157
SNP risk allelers35964523-T
SNPsrs35964523
Merged0
SNP id current35964523
Contextupstream_gene_variant
Intergenic1
Allele frequency0.42
P value0.000008
Pvalue mlog5.09691001300805
P value text(chol, sum)
Or beta
%95 Ci
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitresponse to statin
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036273
Study accessionGCST000635