SNP Detail For rs35955841
1.Mapping Information
Human SNP ID rs35955841
Human chromosome chr14
Human SNP position 64852643
Pig chromosome chr7
Pig SNP position 95307044
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitChagas cardiomyopathy in Tripanosoma cruzi seropositivity
Initial sample207 Brazilian ancestry cases, 306 Brazilian ancestry controls
Replication sampleNA
Region14q23.3
Chromosome idchr14
Chromosome position64852643
Reported geneNR
Mapped geneSPTB
Upstream gene id
Downstream gene id
SNP gene ids6710
Upstream gene distance
Downstream gene distance
SNP risk allelers35955841-?
SNPsrs35955841
Merged0
SNP id current35955841
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitChagas cardiomyopathy, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005529, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002285