SNP Detail For rs35951
1.Mapping Information
Human SNP ID rs35951
Human chromosome chr5
Human SNP position 54296531
Pig chromosome chr16
Pig SNP position 35599805
2.Annotation Information
PubMed ID24962325
JournalDrug Alcohol Depend
Linkwww.ncbi.nlm.nih.gov/pubmed/24962325
StudyGenome-wide survival analysis of age at onset of alcohol dependence in extended high-risk COGA families.
Disease/TraitAlcohol dependence (age at onset)
Initial sample685 European ancestry cases, 1,103 European ancestry controls from 118 families
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position54296531
Reported geneARL15
Mapped geneARL15
Upstream gene id
Downstream gene id
SNP gene ids54622
Upstream gene distance
Downstream gene distance
SNP risk allelers35951-G
SNPsrs35951
Merged0
SNP id current35951
Contextintron_variant
Intergenic0
Allele frequency0.14
P value0.00000001
Pvalue mlog8
P value text
Or beta1.43
%95 Ci[1.31-1.55]
PlatformIllumina [4058415] (imputed)
CNVN
Mapped traitage at onset, alcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004847, http://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST002477