SNP Detail For rs358592
1.Mapping Information
Human SNP ID rs358592
Human chromosome chr4
Human SNP position 21475367
Pig chromosome chr8
Pig SNP position 16124967
2.Annotation Information
PubMed ID20877300
JournalPharmacogenomics J
Linkwww.ncbi.nlm.nih.gov/pubmed/20877300
StudyGenome-wide association study of increasing suicidal ideation during antidepressant treatment in the GENDEP project.
Disease/TraitSuicidal ideation
Initial sample706 European ancestry individuals
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position21475367
Reported geneKCNIP4
Mapped geneKCNIP4
Upstream gene id
Downstream gene id
SNP gene ids80333
Upstream gene distance
Downstream gene distance
SNP risk allelers358592-?
SNPsrs358592
Merged0
SNP id current358592
Contextintron_variant
Intergenic0
Allele frequency0.7
P value0.000003
Pvalue mlog5.52287874528033
P value text(Escitalopram)
Or beta2.56
%95 Ci[NR]
PlatformIllumina [539199]
CNVN
Mapped traitsuicidal ideation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004320
Study accessionGCST000816