Human SNP ID | rs35391 |
---|---|
Human chromosome | chr5 |
Human SNP position | 33955568 |
Pig chromosome | chr16 |
Pig SNP position | 20728799 |
PubMed ID | 19340012 |
---|---|
Journal | J Invest Dermatol |
Link | www.ncbi.nlm.nih.gov/pubmed/19340012 |
Study | Genome-wide association study of tanning phenotype in a population of European ancestry. |
Disease/Trait | Tanning |
Initial sample | 2,287 European ancestry female individuals |
Replication sample | 870 European ancestry female individuals |
Region | 5p13.2 |
Chromosome id | chr5 |
Chromosome position | 33955568 |
Reported gene | MATP |
Mapped gene | SLC45A2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51151 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs35391-T |
SNPs | rs35391 |
Merged | 0 |
SNP id current | 35391 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | 0.44 |
%95 Ci | [0.30-0.58] tanning ability score decrease |
Platform | Illumina [528173] |
CNV | N |
Mapped trait | suntan |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004279 |
Study accession | GCST000371 |