Human SNP ID | rs352236 |
---|---|
Human chromosome | chr13 |
Human SNP position | 69449553 |
Pig chromosome | chr11 |
Pig SNP position | 45909243 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 13q21.33 |
Chromosome id | chr13 |
Chromosome position | 69449553 |
Reported gene | KLHL1 |
Mapped gene | LINC00383 - KLHL1 |
Upstream gene id | 103689913 |
Downstream gene id | 57626 |
SNP gene ids | |
Upstream gene distance | 127452 |
Downstream gene distance | 251040 |
SNP risk allele | rs352236-G |
SNPs | rs352236 |
Merged | 0 |
SNP id current | 352236 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (HDL ) |
Or beta | 0.03 |
%95 Ci | [NR] mg/dL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | high density lipoprotein cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004612 |
Study accession | GCST001762 |