SNP Detail For rs352236
1.Mapping Information
Human SNP ID rs352236
Human chromosome chr13
Human SNP position 69449553
Pig chromosome chr11
Pig SNP position 45909243
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region13q21.33
Chromosome idchr13
Chromosome position69449553
Reported geneKLHL1
Mapped geneLINC00383 - KLHL1
Upstream gene id103689913
Downstream gene id57626
SNP gene ids
Upstream gene distance127452
Downstream gene distance251040
SNP risk allelers352236-G
SNPsrs352236
Merged0
SNP id current352236
Contextintergenic_variant
Intergenic1
Allele frequency0.01
P value0.000002
Pvalue mlog5.69897000433601
P value text(HDL )
Or beta0.03
%95 Ci[NR] mg/dL increase
PlatformIllumina [899892]
CNVN
Mapped traithigh density lipoprotein cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004612
Study accessionGCST001762