Human SNP ID | rs34972666 |
---|---|
Human chromosome | chr20 |
Human SNP position | 2404326 |
Pig chromosome | chr17 |
Pig SNP position | 37543423 |
PubMed ID | 23535033 |
---|---|
Journal | Alzheimers Dement |
Link | www.ncbi.nlm.nih.gov/pubmed/23535033 |
Study | Genome-wide association study of the rate of cognitive decline in Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease (cognitive decline) |
Initial sample | 303 European ancestry cases |
Replication sample | |
Region | 20p13 |
Chromosome id | chr20 |
Chromosome position | 2404326 |
Reported gene | TGM6 |
Mapped gene | TGM6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 343641 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs34972666-? |
SNPs | rs34972666 |
Merged | 0 |
SNP id current | 34972666 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.11 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.23 |
%95 Ci | unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST001915 |