SNP Detail For rs34972666
1.Mapping Information
Human SNP ID rs34972666
Human chromosome chr20
Human SNP position 2404326
Pig chromosome chr17
Pig SNP position 37543423
2.Annotation Information
PubMed ID23535033
JournalAlzheimers Dement
Linkwww.ncbi.nlm.nih.gov/pubmed/23535033
StudyGenome-wide association study of the rate of cognitive decline in Alzheimer__s disease.
Disease/TraitAlzheimer__s disease (cognitive decline)
Initial sample303 European ancestry cases
Replication sample
Region20p13
Chromosome idchr20
Chromosome position2404326
Reported geneTGM6
Mapped geneTGM6
Upstream gene id
Downstream gene id
SNP gene ids343641
Upstream gene distance
Downstream gene distance
SNP risk allelers34972666-?
SNPsrs34972666
Merged0
SNP id current34972666
Contextintron_variant
Intergenic0
Allele frequency0.11
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta0.23
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001915