SNP Detail For rs349045
1.Mapping Information
Human SNP ID rs349045
Human chromosome chr19
Human SNP position 43795740
Pig chromosome chr6
Pig SNP position 46466772
2.Annotation Information
PubMed ID25003214
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25003214
StudyThe correlation between reading and mathematics ability at age twelve has a substantial genetic component.
Disease/TraitReading or mathematical ability
Initial sampleup to 2,794 European ancestry unrelated members of twin pairs
Replication sample2,153 European ancestry individuals
Region19q13.31
Chromosome idchr19
Chromosome position43795740
Reported geneLYPD5, ZNF45, ZNF404
Mapped geneKCNN4 - LYPD5
Upstream gene id3783
Downstream gene id284348
SNP gene ids
Upstream gene distance13601
Downstream gene distance187
SNP risk allelers349045-T
SNPsrs349045
Merged0
SNP id current349045
Contextupstream_gene_variant
Intergenic1
Allele frequency0.52
P value0.000000008
Pvalue mlog8.09691001300805
P value text(reading)
Or beta0.132
%95 Ci[0.087-0.177] unit decrease
PlatformAffymetrix [1588650] (imputed)
CNVN
Mapped traitreading
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005229
Study accessionGCST002522