Human SNP ID | rs349045 |
---|---|
Human chromosome | chr19 |
Human SNP position | 43795740 |
Pig chromosome | chr6 |
Pig SNP position | 46466772 |
PubMed ID | 25003214 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/25003214 |
Study | The correlation between reading and mathematics ability at age twelve has a substantial genetic component. |
Disease/Trait | Reading or mathematical ability |
Initial sample | up to 2,794 European ancestry unrelated members of twin pairs |
Replication sample | 2,153 European ancestry individuals |
Region | 19q13.31 |
Chromosome id | chr19 |
Chromosome position | 43795740 |
Reported gene | LYPD5, ZNF45, ZNF404 |
Mapped gene | KCNN4 - LYPD5 |
Upstream gene id | 3783 |
Downstream gene id | 284348 |
SNP gene ids | |
Upstream gene distance | 13601 |
Downstream gene distance | 187 |
SNP risk allele | rs349045-T |
SNPs | rs349045 |
Merged | 0 |
SNP id current | 349045 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.52 |
P value | 0.000000008 |
Pvalue mlog | 8.09691001300805 |
P value text | (reading) |
Or beta | 0.132 |
%95 Ci | [0.087-0.177] unit decrease |
Platform | Affymetrix [1588650] (imputed) |
CNV | N |
Mapped trait | reading |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005229 |
Study accession | GCST002522 |