Human SNP ID | rs348495 |
---|---|
Human chromosome | chr4 |
Human SNP position | 45182425 |
Pig chromosome | chr8 |
Pig SNP position | 37347015 |
PubMed ID | 23583978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23583978 |
Study | A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry. |
Disease/Trait | Body mass index |
Initial sample | 37,956 African American individuals, 1,188 Nigerian ancestry individuals |
Replication sample | 27,661 African America/Afro-Caribbean individuals, 4,607 Sub-Saharan African ancestry individuals, 123,706 European ancestry inidividuals |
Region | 4p12 |
Chromosome id | chr4 |
Chromosome position | 45182425 |
Reported gene | GNPDA2 |
Mapped gene | LOC105374441 - PRKRIRP9 |
Upstream gene id | 105374441 |
Downstream gene id | 100131309 |
SNP gene ids | |
Upstream gene distance | 257838 |
Downstream gene distance | 141320 |
SNP risk allele | rs348495-G |
SNPs | rs348495 |
Merged | 0 |
SNP id current | 348495 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.34 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | (AA and Sub-Saharan) |
Or beta | 0.051 |
%95 Ci | [0.035-0.067] unit increase |
Platform | Affymetrix, Illumina [3283202] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001967 |