SNP Detail For rs348495
1.Mapping Information
Human SNP ID rs348495
Human chromosome chr4
Human SNP position 45182425
Pig chromosome chr8
Pig SNP position 37347015
2.Annotation Information
PubMed ID23583978
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583978
StudyA meta-analysis identifies new loci associated with body mass index in individuals of African ancestry.
Disease/TraitBody mass index
Initial sample37,956 African American individuals, 1,188 Nigerian ancestry individuals
Replication sample27,661 African America/Afro-Caribbean individuals, 4,607 Sub-Saharan African ancestry individuals, 123,706 European ancestry inidividuals
Region4p12
Chromosome idchr4
Chromosome position45182425
Reported geneGNPDA2
Mapped geneLOC105374441 - PRKRIRP9
Upstream gene id105374441
Downstream gene id100131309
SNP gene ids
Upstream gene distance257838
Downstream gene distance141320
SNP risk allelers348495-G
SNPsrs348495
Merged0
SNP id current348495
Contextintergenic_variant
Intergenic1
Allele frequency0.34
P value0.0000000002
Pvalue mlog9.69897000433601
P value text(AA and Sub-Saharan)
Or beta0.051
%95 Ci[0.035-0.067] unit increase
PlatformAffymetrix, Illumina [3283202] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001967