Human SNP ID | rs347272 |
---|---|
Human chromosome | chr1 |
Human SNP position | 162348708 |
Pig chromosome | chr4 |
Pig SNP position | 95874711 |
PubMed ID | 24952745 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24952745 |
Study | Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization. |
Disease/Trait | QT interval |
Initial sample | Up to 70,389 European ancestry individuals, up to 672 Orcadian individuals |
Replication sample | Up to 33,316 European ancestry individuals |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 162348708 |
Reported gene | NOS1AP |
Mapped gene | NOS1AP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9722 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs347272-A |
SNPs | rs347272 |
Merged | 0 |
SNP id current | 347272 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.132 |
P value | 1E-37 |
Pvalue mlog | 37 |
P value text | |
Or beta | 1.8 |
%95 Ci | [1.53-2.07] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST002500 |