SNP Detail For rs34698933
1.Mapping Information
Human SNP ID rs34698933
Human chromosome chr6
Human SNP position 11146658
Pig chromosome chr7
Pig SNP position 8162680
2.Annotation Information
PubMed ID25130324
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/25130324
StudyA genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus.
Disease/TraitHeschl__s gyrus morphology
Initial sample1,778 European ancestry individuals, 1,276 individuals
Replication sampleNA
Region6p24.2
Chromosome idchr6
Chromosome position11146658
Reported geneSMIM13
Mapped geneSMIM13 - NEDD9
Upstream gene id221710
Downstream gene id4739
SNP gene ids
Upstream gene distance7920
Downstream gene distance36640
SNP risk allelers34698933-A
SNPsrs34698933
Merged0
SNP id current34698933
Contextintergenic_variant
Intergenic1
Allele frequency0.65
P value0.000003
Pvalue mlog5.52287874528033
P value text(Left HG thickness)
Or beta0.0328
%95 Ciunit increase
PlatformAffymetrix, Illumina [4103035] (imputed)
CNVN
Mapped traitHeschl__s gyrus morphology measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005852
Study accessionGCST002579