Human SNP ID | rs34698933 |
---|---|
Human chromosome | chr6 |
Human SNP position | 11146658 |
Pig chromosome | chr7 |
Pig SNP position | 8162680 |
PubMed ID | 25130324 |
---|---|
Journal | Genes Brain Behav |
Link | www.ncbi.nlm.nih.gov/pubmed/25130324 |
Study | A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus. |
Disease/Trait | Heschl__s gyrus morphology |
Initial sample | 1,778 European ancestry individuals, 1,276 individuals |
Replication sample | NA |
Region | 6p24.2 |
Chromosome id | chr6 |
Chromosome position | 11146658 |
Reported gene | SMIM13 |
Mapped gene | SMIM13 - NEDD9 |
Upstream gene id | 221710 |
Downstream gene id | 4739 |
SNP gene ids | |
Upstream gene distance | 7920 |
Downstream gene distance | 36640 |
SNP risk allele | rs34698933-A |
SNPs | rs34698933 |
Merged | 0 |
SNP id current | 34698933 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.65 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Left HG thickness) |
Or beta | 0.0328 |
%95 Ci | unit increase |
Platform | Affymetrix, Illumina [4103035] (imputed) |
CNV | N |
Mapped trait | Heschl__s gyrus morphology measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005852 |
Study accession | GCST002579 |