Human SNP ID | rs346923 |
---|---|
Human chromosome | chr4 |
Human SNP position | 52545963 |
Pig chromosome | chr8 |
Pig SNP position | 41603571 |
PubMed ID | 19260141 |
---|---|
Journal | Croat Med J |
Link | www.ncbi.nlm.nih.gov/pubmed/19260141 |
Study | Genome-wide association study of biochemical traits in Korcula Island, Croatia. |
Disease/Trait | Biochemical measures |
Initial sample | 898 Korculan individuals |
Replication sample | NA |
Region | 4q12 |
Chromosome id | chr4 |
Chromosome position | 52545963 |
Reported gene | USP46 |
Mapped gene | SPATA18 - USP46 |
Upstream gene id | 132671 |
Downstream gene id | 64854 |
SNP gene ids | |
Upstream gene distance | 448658 |
Downstream gene distance | 44997 |
SNP risk allele | rs346923-A |
SNPs | rs346923 |
Merged | 0 |
SNP id current | 346923 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.13 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (triglycerides) |
Or beta | 0.28 |
%95 Ci | [0.17-0.39] mmol/L decrease |
Platform | Illumina [316730] |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST000328 |