SNP Detail For rs346923
1.Mapping Information
Human SNP ID rs346923
Human chromosome chr4
Human SNP position 52545963
Pig chromosome chr8
Pig SNP position 41603571
2.Annotation Information
PubMed ID19260141
JournalCroat Med J
Linkwww.ncbi.nlm.nih.gov/pubmed/19260141
StudyGenome-wide association study of biochemical traits in Korcula Island, Croatia.
Disease/TraitBiochemical measures
Initial sample898 Korculan individuals
Replication sampleNA
Region4q12
Chromosome idchr4
Chromosome position52545963
Reported geneUSP46
Mapped geneSPATA18 - USP46
Upstream gene id132671
Downstream gene id64854
SNP gene ids
Upstream gene distance448658
Downstream gene distance44997
SNP risk allelers346923-A
SNPsrs346923
Merged0
SNP id current346923
Contextintergenic_variant
Intergenic1
Allele frequency0.13
P value0.000002
Pvalue mlog5.69897000433601
P value text(triglycerides)
Or beta0.28
%95 Ci[0.17-0.39] mmol/L decrease
PlatformIllumina [316730]
CNVN
Mapped traittriglyceride measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004530
Study accessionGCST000328