SNP Detail For rs34637584
1.Mapping Information
Human SNP ID rs34637584
Human chromosome chr12
Human SNP position 40340400
Pig chromosome chr5
Pig SNP position 74619829
2.Annotation Information
PubMed ID21738487
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738487
StudyWeb-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson__s disease.
Disease/TraitParkinson__s disease
Initial sample3,426 European ancestry cases, 29,624 European ancestry controls
Replication sampleNA
Region12q12
Chromosome idchr12
Chromosome position40340400
Reported geneLRRK2
Mapped geneLRRK2
Upstream gene id
Downstream gene id
SNP gene ids120892
Upstream gene distance
Downstream gene distance
SNP risk allelers34637584-A
SNPsrs34637584
Merged0
SNP id current34637584
Contextmissense_variant
Intergenic0
Allele frequency0.002
P value2E-28
Pvalue mlog27.698970004336
P value text
Or beta9.62
%95 Ci[6.43-14.37]
PlatformIllumina [522782]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001126