Human SNP ID | rs34637584 |
---|---|
Human chromosome | chr12 |
Human SNP position | 40340400 |
Pig chromosome | chr5 |
Pig SNP position | 74619829 |
PubMed ID | 21738487 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21738487 |
Study | Web-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson__s disease. |
Disease/Trait | Parkinson__s disease |
Initial sample | 3,426 European ancestry cases, 29,624 European ancestry controls |
Replication sample | NA |
Region | 12q12 |
Chromosome id | chr12 |
Chromosome position | 40340400 |
Reported gene | LRRK2 |
Mapped gene | LRRK2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 120892 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs34637584-A |
SNPs | rs34637584 |
Merged | 0 |
SNP id current | 34637584 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.002 |
P value | 2E-28 |
Pvalue mlog | 27.698970004336 |
P value text | |
Or beta | 9.62 |
%95 Ci | [6.43-14.37] |
Platform | Illumina [522782] |
CNV | N |
Mapped trait | Parkinson__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508 |
Study accession | GCST001126 |