SNP Detail For rs34562493
1.Mapping Information
Human SNP ID rs34562493
Human chromosome chr3
Human SNP position 128098179
Pig chromosome JH118478-1
Pig SNP position 32604
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q21.3
Chromosome idchr3
Chromosome position128098179
Reported geneRUVBL1
Mapped geneRUVBL1
Upstream gene id
Downstream gene id
SNP gene ids8607
Upstream gene distance
Downstream gene distance
SNP risk allelers34562493-T
SNPsrs34562493
Merged0
SNP id current34562493
Contextintron_variant
Intergenic0
Allele frequency0.153
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.058
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262