Human SNP ID | rs34517613 |
---|---|
Human chromosome | chr17 |
Human SNP position | 28283226 |
Pig chromosome | chr12 |
Pig SNP position | 19066735 |
PubMed ID | 24256812 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24256812 |
Study | A genome-wide association meta-analysis identifies a novel locus at 17q11.2 associated with sporadic amyotrophic lateral sclerosis. |
Disease/Trait | Amyotrophic lateral sclerosis (sporadic) |
Initial sample | 6,100 European ancestry cases, 7,125 European ancestry controls |
Replication sample | 2,074 European ancestry cases, 2,556 European ancestry controls |
Region | 17q11.2 |
Chromosome id | chr17 |
Chromosome position | 28283226 |
Reported gene | SALM1 |
Mapped gene | KRT18P55 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 284085 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs34517613-T |
SNPs | rs34517613 |
Merged | 0 |
SNP id current | 34517613 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000009 |
Pvalue mlog | 8.04575749056067 |
P value text | |
Or beta | 1.2 |
%95 Ci | [1.12-1.29] |
Platform | Illumina [~ 7000000] (imputed) |
CNV | N |
Mapped trait | sporadic amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001357 |
Study accession | GCST002283 |