SNP Detail For rs34289708
1.Mapping Information
Human SNP ID rs34289708
Human chromosome chr16
Human SNP position 24084053
Pig chromosome chr3
Pig SNP position 23086993
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region16p12.2
Chromosome idchr16
Chromosome position24084053
Reported genePRKCB
Mapped genePRKCB
Upstream gene id
Downstream gene id
SNP gene ids5579
Upstream gene distance
Downstream gene distance
SNP risk allelers34289708-C
SNPsrs34289708
Merged0
SNP id current34289708
Contextintron_variant
Intergenic0
Allele frequency0.96
P value0.0000006
Pvalue mlog6.22184874961635
P value text(AA)
Or beta0.088
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265