SNP Detail For rs34198350
1.Mapping Information
Human SNP ID rs34198350
Human chromosome chr2
Human SNP position 47942243
Pig chromosome chr3
Pig SNP position 98504457
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitQT interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region2p16.3
Chromosome idchr2
Chromosome position47942243
Reported geneNR
Mapped geneLOC105374591
Upstream gene id
Downstream gene id
SNP gene ids105374591
Upstream gene distance
Downstream gene distance
SNP risk allelers34198350-?
SNPsrs34198350
Merged0
SNP id current34198350
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitQT interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002278