SNP Detail For rs33993717
1.Mapping Information
Human SNP ID rs33993717
Human chromosome chr2
Human SNP position 102718982
Pig chromosome chr3
Pig SNP position 53949795
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region2q12.1
Chromosome idchr2
Chromosome position102718982
Reported geneMFSD9
Mapped geneMFSD9
Upstream gene id
Downstream gene id
SNP gene ids84804
Upstream gene distance
Downstream gene distance
SNP risk allelers33993717-?
SNPsrs33993717
Merged0
SNP id current33993717
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(SF4)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651